Package profile
squidpy
- Summary: Spatial Single Cell Analysis in Python
- Author: Giovanni Palla, Michal Klein, Hannah Spitzer
- Homepage: https://github.com/scverse/squidpy
- Source: https://github.com/scverse/squidpy (Repo profile)
- Number of releases: 20
- First release: 1.0.0 on 2021-02-20
- Latest release: 1.6.5 on 2025-03-16
Releases
PyPI Downloads
Dependencies
Squidpy has 43 dependencies, 18 of which optional.| Dependency | Optional |
|---|---|
| aiohttp | false |
| anndata | false |
| cycler | false |
| dask | false |
| dask-image | false |
| docrep | false |
| fsspec | false |
| matplotlib | false |
| matplotlib-scalebar | false |
| networkx | false |
| numba | false |
| numpy | false |
| omnipath | false |
| pandas | false |
| pillow | false |
| scanpy | false |
| scikit-image | false |
| scikit-learn | false |
| spatialdata | false |
| statsmodels | false |
| tifffile | false |
| tqdm | false |
| validators | false |
| xarray | false |
| zarr | false |
| coverage | true |
| ipython | true |
| ipywidgets | true |
| myst-nb | true |
| nbsphinx | true |
| pre-commit | true |
| pytest | true |
| pytest-cov | true |
| pytest-mock | true |
| pytest-xdist | true |
| sphinx | true |
| sphinx-autodoc-annotation | true |
| sphinx-autodoc-typehints | true |
| sphinx-copybutton | true |
| sphinx-rtd-theme | true |
| sphinxcontrib-bibtex | true |
| sphinxcontrib-spelling | true |
| tox | true |