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| Dependency | Optional | Group |
|---|---|---|
| click | false | |
| curies | false | |
| pydantic | false | |
| pydantic-extra-types | false |
| Package | Optional | Group |
|---|---|---|
| pubmed-downloader | false | |
| pyobo | false | |
| qualo | false | |
| orcid-downloader | true | autocomplete |
| pystow | false |
| tqdm | false |
| bioregistry | true | ontology |
| boto3 | true | gilda-default |
| fastapi | true | web |
| gilda | true | gilda |
| gilda-slim | true | gilda-slim |
| gliner | true | gliner |
| more-itertools | true | gilda |
| nltk | true | gilda |
| numpy | true | pandas |
| pandas | true | pandas |
| rdflib | true | rdflib |
| scispacy | true | scispacy |
| spacy | true | scispacy |
| uvicorn | true | web |