© 2025-2026 PySpect
| Dependency | Optional | Group |
|---|---|---|
| array-api-compat | false | |
| h5py | false | |
| legacy-api-wrap | false | |
| natsort | false |
| Package | Optional | Group |
|---|---|---|
| anndata2ri | false | |
| annsel | false | |
| cellxgene-census | false | |
| mudata | false | |
| napari-spatialdata | false | |
| readfcs | false | |
| scanpy | false | |
| somacore | false | |
| spatialdata | false | |
| spatialdata-io | false | |
| squidpy | false | |
| tiledb-cloud | false | |
| tiledbsoma | false | |
| graphtools | true | test |
| magic-impute | true | test |
| quilt3 | true | anndata |
| scprep | true | optional |
| scverse-misc | true | datasets |
| spatialleiden | true | docs |
| numpy | false |
| packaging | false |
| pandas | false |
| scipy | false |
| scverse-misc | false |
| typing-extensions | false |
| zarr | false |
| aiohttp | true | lazy |
| cupy | true | gpu |
| cupy-cuda11x | true | cu11 |
| cupy-cuda12x | true | cu12 |
| cupy-cuda13x | true | cu13 |
| dask | true | dask |
| requests | true | lazy |
| xarray | true | lazy |